Installing pyramidal¶
pyramidal has the following strong dependencies:
- NEURON (Python module, for installation instructions see http://www.davison.webfactional.com/notes/installation-neuron-python/)
- pyMOOSE (for installation instructions see below)
- libNeuroML (for installation see below)
- numpy (http://numpy.scipy.org/)
pyMOOSE instllation¶
The latest version of MOOSE with a Python interface can be installed as follows:
svn co http://moose.svn.sourceforge.net/svnroot/moose/moose/branches/dh_branch moose
cd moose
make pymoose
sudo cp -r python/moose /usr/lib/python2.7/dist-packages
Get a read only copy of libNeuroML¶
Install git and type:
git clone git://github.com/NeuralEnsemble/libNeuroML.git
More details about the git repository and making your own branch/fork are here.
Install libNeuroML¶
Use the standard install method for Python packages:
sudo python setup.py install
Get a read only copy of pyramidal¶
git clone https://github.com/vellamike/pyramidal.git
Install pyramidal¶
Use the standard install method for Python packages:
sudo python setup.py install